<p><strong>Clarity 10.2 expands instrument control capabilities with new control modules and updates the MS extension to help you work more efficiently.</strong></p><h4><a target="_blank" rel="noopener noreferrer" href="https://lcms.labrulez.com/products/999"><strong>Clarity</strong></a><strong> 10.2 highlights</strong></h4><ul><li>New and updated control modules</li><li>Improved MS data import and export</li><li>Obsolete hardware support ended</li></ul><h4><strong>Instrument control modules</strong></h4><p>Clarity 10.2 introduces new instrument control modules from Annuo (AS-3117, FAS-3823) and updated instrument controls form Sykam and Ecom.</p><p><img src="https://storage.googleapis.com/labrulez-bucket-strapi-h3hsga3/Data_Apex_Instrument_control_modules_5de26782b0.jpg" alt="DataApex: Instrument control modules" srcset="https://storage.googleapis.com/labrulez-bucket-strapi-h3hsga3/thumbnail_Data_Apex_Instrument_control_modules_5de26782b0.jpg 228w," sizes="100vw" width="380" height="260"></p><h4><strong>MS data import/export improvements</strong></h4><p>Clarity improves MS data exchange, especially for *.cdf files. MS instruments now support export and import of multiple spectral data and non-spectral signal data in the same CDF file. Import also better handles uniform sampling information, m/z Step values, scale factors, and file names with non-ASCII characters. Exporting individual chromatogram signals from MS instruments is now available through a separate Export Chromatogram dialog.</p><p><img src="https://storage.googleapis.com/labrulez-bucket-strapi-h3hsga3/Data_Apex_MS_data_import_export_improvements_a7967a4020.jpg" alt="DataApex: MS data import-export improvements" srcset="https://storage.googleapis.com/labrulez-bucket-strapi-h3hsga3/thumbnail_Data_Apex_MS_data_import_export_improvements_a7967a4020.jpg 228w," sizes="100vw" width="378" height="259"></p><h4><strong>Obsolete hardware support terminated</strong></h4><p>Due to changes in Windows driver security requirements, this update discontinues support for obsolete hardware, including INT7, INT9, U-PAD, U-PAD2, and CB20.</p><p><img src="https://storage.googleapis.com/labrulez-bucket-strapi-h3hsga3/Data_Apex_Obsolete_hardware_support_terminated_24d9329419.jpg" alt="DataApex: Obsolete hardware support terminated" srcset="https://storage.googleapis.com/labrulez-bucket-strapi-h3hsga3/thumbnail_Data_Apex_Obsolete_hardware_support_terminated_24d9329419.jpg 228w," sizes="100vw" width="378" height="259"></p><blockquote><p><strong>Explore the complete list of all changes, fixes, and additions in version 10.2.</strong></p><p><strong>👉</strong><a target="_blank" rel="noopener noreferrer" href="https://www.dataapex.com/version_history?product=1"><strong>See the complete changelog&nbsp;</strong></a></p></blockquote>

Clarity Chromatography Software 10.2 released!

<p><strong>Traditional EI library searching works exceptionally well when the unknown compound is already present in the spectral library. However, analytical chemists frequently encounter compounds that are structurally related to library entries but are not exact matches. NIST's EI Hybrid Search addresses this challenge by combining conventional spectral matching with mass-shifted fragment alignment, allowing the identification of analogs, derivatives, and novel compounds that may not exist in the database.</strong></p><p>This guide summarizes the workflow presented by James Little and demonstrates how to use NIST 26 Hybrid Search in conjunction with the Chromatogram Window and MS Interpreter to obtain more meaningful structural information from unknown EI GC-MS spectra.</p><blockquote><p><a target="_blank" rel="noopener noreferrer" href="https://gcms.labrulez.com/paper/33370"><strong>You can download PDF Handout for this guide HERE</strong></a></p></blockquote><h4><strong>Why Hybrid Search Matters</strong></h4><p>Conventional EI library searching relies on direct matching between an unknown spectrum and spectra stored in a library. Hybrid Search expands this concept by allowing fragment ions to be matched even when they are shifted by a consistent mass difference (Δm). This enables the software to recognize compounds that differ by substituents or structural modifications.</p><p><strong>Key advantages include:</strong></p><ul><li>Identification of structurally related compounds not present in the library</li><li>Detection of analogs, derivatives, and emerging compounds</li><li>Integration of exact fragment matches and mass-shifted matches into a single score</li><li>Improved interpretation of unknowns through proposed structural modifications</li><li>Enhanced confidence when molecular weight information is available</li></ul><p>Although Hybrid Search does not require the molecular ion to be present, performance improves significantly when the molecular weight can be estimated or constrained. In these cases, the observed mass difference between the unknown and library compounds can often be translated directly into a plausible chemical modification.</p><h4><strong>Configuring Hybrid Search</strong></h4><p>Before performing a search, the Hybrid Search settings should be configured within the NIST Library Search window.</p><p>Recommended settings:</p><ul><li>Select the Similarity search mode</li><li>Enable Hybrid Search</li><li>Keep the In Spectrum option checked under normal circumstances</li><li>Allow the software to estimate the molecular weight automatically</li><li>If the estimated molecular weight appears incorrect, manually enter a nominal molecular weight</li><li>Select all relevant libraries (NIST, Wiley, user libraries, etc.)</li><li>Save the configuration for future use</li></ul><p>The selected molecular weight used to constrain the search is displayed in the lower-right corner after the search is completed.</p><h4><strong>Optimizing the Results Display</strong></h4><p>Hybrid Search produces several unique parameters that are not shown in the default results table.</p><p>Additional columns should be added by right-clicking within the results table and selecting Properties. Recommended columns include:</p><ul><li>DeltaMass</li><li>dForm</li><li>pctRelForm</li><li>o.Match (equivalent to the traditional EI Normal Match score)</li></ul><p>Without these parameters, much of the structural interpretation power of Hybrid Search is lost.</p><h4><strong>Working with Spectra from the Chromatogram Window</strong></h4><p>Currently, the Chromatogram Window performs standard EI library searching. When a potentially interesting unknown is encountered:</p><ul><li>Perform the normal EI search in the Chromatogram Window</li><li>Send the spectrum to the standalone Library Search module</li><li>Perform a Hybrid Search using the enhanced Hybrid Search functionality</li></ul><p>This workflow combines rapid screening with advanced structural interpretation.</p><h4><strong>Understanding Key Hybrid Search Parameters</strong></h4><h5><strong>DeltaMass (Δm)</strong></h5><p>DeltaMass represents the mass difference between the unknown compound and the matched library compound.</p><p>A consistent Δm across multiple high-scoring hits often indicates a specific structural modification.</p><h5><strong>dForm</strong></h5><p>dForm provides a proposed elemental composition that explains the observed mass difference.</p><p>Examples include:</p><ul><li>H–1F</li><li>CH₂</li><li>O–1</li><li>C₁H₃F</li></ul><p>These transformations can suggest likely chemical modifications between the library compound and the unknown.</p><h5><strong>pctRelForm</strong></h5><p>New in NIST 26, pctRelForm estimates how frequently a given elemental transformation occurs relative to the most common transformation (CH₂ = 100%).</p><p>Interpretation:</p><ul><li>High values indicate chemically plausible and commonly observed transformations</li><li>Very low values suggest the proposed transformation may be accidental or unlikely</li></ul><h5><strong>o.Match</strong></h5><p>Represents the traditional EI match score and allows comparison between standard searching and Hybrid Search results.</p><h4><strong>Case Study: Identifying a Fluorinated Unknown</strong></h4><p>The presentation demonstrates the identification of an unknown compound with a proposed molecular weight of 152 Da.</p><p>Hybrid Search returned several high-scoring hits with consistent evidence suggesting fluorine substitution:</p><p><strong>Hit #1</strong></p><ul><li>Library MW: 134</li><li>DeltaMass: +18</li><li>dForm: H–1F</li><li>Interpretation: Addition of fluorine</li></ul><p><strong>Hit #5</strong></p><ul><li>Library MW: 138</li><li>DeltaMass: +14</li><li>dForm: CH₂</li><li>Interpretation: Related fluorinated analog</li></ul><p><strong>Hit #6</strong></p><ul><li>Library MW: 168</li><li>DeltaMass: –16</li><li>dForm: O–1</li><li>Interpretation: Structurally consistent fluorinated compound</li></ul><p>Multiple independent hits converged on the same conclusion: the unknown was likely a fluorinated analog of known aromatic compounds.</p><p>This illustrates the major strength of Hybrid Search: identifying structural relationships even when the exact compound is absent from the library.</p><h4><strong>Moving from Hybrid Search to Structural Interpretation</strong></h4><p>Once a plausible structure is identified:</p><h5><strong>Step 1 – Export the Structure</strong></h5><p>From the Hybrid Search results:</p><ul><li>Right-click the best hit</li><li>Use Send To → Default Structure Editor</li><li>Open the structure in a drawing program such as ChemSketch</li><li>Copy the proposed structure to the clipboard</li></ul><h5><strong>Step 2 – Open MS Interpreter</strong></h5><p>Within MS Interpreter:</p><ul><li>Paste the proposed structure</li><li>Load the unknown spectrum</li><li>Compare predicted fragmentation with observed ions</li><li>Evaluate isotope patterns and fragment assignments</li></ul><h5><strong>Step 3 – Validate the Proposal</strong></h5><p>Indicators of a good structural proposal include:</p><ul><li>Consistent isotope ratios</li><li>Logical fragmentation pathways</li><li>Agreement between observed and predicted fragment ions</li><li>Multiple Hybrid Search hits supporting the same structural modification</li></ul><p>In the example presented, MS Interpreter showed excellent agreement between the proposed fluorinated structure and the observed EI spectrum, although the exact positions of the fluorine and methyl substituents on the aromatic ring could not be definitively assigned.</p><h4><strong>Best Practices</strong></h4><ul><li>Always review DeltaMass, dForm, and pctRelForm together</li><li>Do not rely solely on the highest match score</li><li>Give greater weight to transformations supported by multiple independent hits</li><li>Use molecular weight information whenever possible</li><li>Confirm structural hypotheses using MS Interpreter</li><li>Consider Hybrid Search as a structure-elucidation tool rather than simply a library search tool</li></ul><h4><strong>Conclusion</strong></h4><p>NIST 26 Hybrid Search significantly extends the capabilities of conventional EI library searching by identifying structural relationships between unknown compounds and library entries. Through the use of DeltaMass calculations, elemental transformation analysis (dForm), and statistical plausibility metrics (pctRelForm), Hybrid Search provides valuable clues for elucidating compounds that are absent from spectral libraries.</p><p>When combined with MS Interpreter, it becomes a powerful workflow for the characterization of unknowns, analogs, degradation products, metabolites, and emerging compounds in EI GC-MS analysis.</p>

Lib Search: Similarity EI Hybrid Search for Spectra Sent from Chromatogram Window

<p><strong>Our Library never stops expanding. What are the most recent contributions to LabRulezGCMS Library in the week of 22nd June 2026? Check out new documents from the field of the gas phase, especially GC and GC/MS techniques!</strong></p><blockquote><p><span style="font-size:20px;">👉 </span><a target="_blank" rel="noopener noreferrer" href="https://gcms.labrulez.com/library"><span style="font-size:20px;"><strong>SEARCH THE LARGEST REPOSITORY OF DOCUMENTS ABOUT GCMS AND RELATED TECHNIQUES</strong></span></a></p></blockquote><blockquote><p><strong>👉 Need info about different analytical techniques?</strong> Peek into <a target="_blank" rel="noopener noreferrer" href="https://lcms.labrulez.com/library"><strong>LabRulezLCMS</strong></a> or <a target="_blank" rel="noopener noreferrer" href="https://icpms.labrulez.com/library"><strong>LabRulezICPMS</strong></a> libraries.</p></blockquote><p>This week we bring you brochure by <strong>Agilent Technologies, </strong>application note<strong> </strong>by<strong> Shimadzu </strong>and posters by <strong>MDCW / William &amp; Mary </strong>and <strong>Waters Corporation / ASMS!</strong></p><h3><strong>1. Agilent Technologies: Operational efficiency for your GC and GC/MS labs with the </strong><a target="_blank" rel="noopener noreferrer" href="https://gcms.labrulez.com/library?mainauthorItems=10&amp;search=8890B"><strong>Agilent 8890B gas chromatography system</strong></a></h3><ul><li>Brochure</li><li><a target="_blank" rel="noopener noreferrer" href="https://gcms.labrulez.com/labrulez-bucket-strapi-h3hsga3/br_8890b_gc_5994_9205en_agilent_fb5db29527.pdf"><strong>Full PDF for download</strong></a></li></ul><section><div><div><div><div><div><div><h4><strong>Analyze more samples every day with faster cycle times&nbsp;</strong></h4><p>The <a target="_blank" rel="noopener noreferrer" href="https://gcms.labrulez.com/library?mainauthorItems=10&amp;search=8890B"><strong>8890B GC </strong></a>provides faster maximum oven temperature ramps and cooldown rates for conventional dual-channel GC. If you want even faster cycle times, an optional rapid cooling fan is available.&nbsp;</p><h4><strong>Achieve excellent repeatability across multiple injections&nbsp;</strong></h4><p>Consistent retention time and area count performance are the cornerstone of what you can expect from the 8890B GC. The system also meets all specifications required for regulatory methods such as USP Method &lt;467&gt; (residual solvents).</p><h4><strong>Shine a new light on your connections and components&nbsp;</strong></h4><p>Make maintenance easier and faster with a built-in oven light that illuminates the internal space on the 8890B GC. That means you can perform tasks like troubleshooting and column installation in less time—and with fewer errors.</p><h4><strong>Boost GC performance with capillary flow technology&nbsp;</strong></h4><ul><li><strong>Backflush</strong> significantly reduces timing between injections, increasing productivity.&nbsp;</li><li><strong>Purged Ultimate unions</strong> provide leak-free connections, reducing downtime.&nbsp;</li><li><strong>Flow splitters</strong> enable data collection from up to three detectors.&nbsp;</li><li><strong>New CFT calculators</strong> let you download calculated setpoints to your method—avoiding time-consuming, error-prone manual input.&nbsp;</li><li><strong>Multidimensional chromatography:&nbsp;</strong><ul><li><strong>Deans Switch</strong> facilitates heart cutting, enabling resolution of trace compound in complex matrices.&nbsp;</li><li><strong>GC x GC flow modulation</strong> enables multidimensional chromatography without the need for cryogen</li></ul></li></ul><h4><strong>Helium conservation module&nbsp;</strong></h4><p>Extend the life of your helium tanks by up to 30 times. The Agilent helium conservation module allows you to use helium for your GC runs and switch to a different gas (typically nitrogen) when your GC is idle. That means you can achieve better control of laboratory operating expenses and avoid workflow disruptions.</p><h4><strong>Alternative carrier gas support&nbsp;</strong></h4><p>Alternative carrier gases like hydrogen and nitrogen are popular low-cost options.&nbsp;</p><p>The <strong>Agilent Hydrogen Sensor Module Series 2 </strong>option adds built-in peace of mind when operating with H2 gas.&nbsp;</p><p>The <strong>Agilent HydroInert source </strong>minimizes sensitivity loss and spectral anomalies associated with H2. It also:&nbsp;</p><ul><li>Maintains spectral fidelity, even for compounds highly susceptible to hydrogenation.&nbsp;</li><li>Improves peak shape for high-boilers, especially polycyclic aromatic hydrocarbons (PAHs)</li></ul><h3><strong>2. MDCW / William &amp; Mary: Decomposition Analysis Using Differing Data Processing Methods to Identify Volatile Organic Compounds</strong></h3><ul><li>Poster</li><li><a target="_blank" rel="noopener noreferrer" href="https://gcms.labrulez.com/labrulez-bucket-strapi-h3hsga3/P_25_Weina_2ae94f0998.pdf"><strong>Full PDF for download</strong></a></li></ul><section><div><div><div><div><div><div><p>When a body decomposes it emits volatile organic compounds (VOCs). VOCs from decomposing remains have been studied before,1 however there is a gap that remains in the knowledge on VOCs that evolve from submerged decomposing remains. 2 In this study, submerged animal tissue was tested to see how the VOCs can be utilized in forensic settings.&nbsp;</p><p>This study used data obtained last summer using comprehensive two-dimensional gas chromatography – time-of-flight mass spectrometry (GC×GC-TOFMS). Pigs (Sus scrofa domesticus) are often used as analogs in decomposition studies due to similarities with humans. 3 In this study, pork belly samples were submerged in mason jars filled with water and stored at different temperatures. The GC×GC-TOFMS instrument was used to collect odor from above water samples for a period of twelve days.</p><p>GC×GC is often used to analyze complex odor profiles. When analyzing samples with GC×GC, there is a lack of standardization to process the data acquired from time trials. There is a need to discover effective ways to track VOCs for chemical identification and longitudinal analysis.</p><p>The goal of this research was to compare different software approaches to analyze GC×GC longitudinal data to achieve accurate analyte identification, representation of data over time, and effective class characterization.</p><h4><strong>Methods</strong></h4><p>For the first four days, 5 mL of water was taken and run on the <a target="_blank" rel="noopener noreferrer" href="https://gcms.labrulez.com/products/37"><strong>GC×GC-TOFMS</strong></a>. Thereafter, the samples were sampled and run every three days until day twelve. Data were analyzed initially using <a target="_blank" rel="noopener noreferrer" href="https://gcms.labrulez.com/products/41"><strong>ChromaTOF</strong></a> (LECO Corporation). The samples were then analyzed using <a target="_blank" rel="noopener noreferrer" href="https://gcms.labrulez.com/products/348"><strong>ChromaTOF Tile </strong></a>and <a target="_blank" rel="noopener noreferrer" href="https://gcms.labrulez.com/products/1873"><strong>ChromaTOF Sync 2D</strong></a> to compare how they can be used in a forensic setting.</p><p>Peak tables were curated in Tile and Sync 2D. Then, ChromaTOF was used as a guide to confirm which peaks were identified correctly. If the compound was correctly identified, the peak would be accepted or kept on the table. If not correctly identified, the peak would either be rejected or deleted. Once the tables were complete from the different software approaches, they were exported to Excel for further comparison.</p><p>In excel, the relevant hits that were identified as decomposition VOCs were compared across the software approaches. The compounds that were most commonly found were compared to existing literature on decomposition VOCs. From there, two tables were built; where one table was compounds confirmed with literature and the other table was compounds not confirmed with literature.</p><p>Comparison between software approaches included looking at different criteria to see which method was the most effective and efficient. The criteria included how long the software approach took, the number of compounds found in each software approach, the accuracy of peak area in the software approach compared to ChromaTOF data, and principal component analysis (PCA) comparison to see which software approach was best used for forensic practice or research.</p><h4><strong>Conclusions</strong></h4><p>Sync 2D showed the capability of showing trends in decomposition compounds</p><ul><li>This software approach can be used in research environment where longitudinal data is needed to determine the trends of decomposition data&nbsp;</li><li>Best purpose: research applications requiring longitudinal tracking&nbsp;</li></ul><p>Coefficient of Variance’s and Fold Change’s PCA plots showed their ability for clear class differentiation&nbsp;</p><ul><li>The two software approaches can be used to distinguish water containing decomposition in a crime scene&nbsp;</li><li>Best purpose: comparison at a single point and time [detailed analysis]&nbsp;</li></ul><p>Fisher Ratio showed a proficiency in identifying top differentiating compounds and showed aptitude for class differentiation&nbsp;</p><ul><li>The software approach would be helpful for cursory analysis for crime scene evidence&nbsp;</li><li>Best purpose: quick comparison of biggest difference for swift identification</li></ul><h3><strong>3. Shimadzu: Determination of Ester and Linolenic Acid Methyl Ester Contents in Biodiesel According to EN 14103:2020</strong></h3><ul><li>Application note</li><li><a target="_blank" rel="noopener noreferrer" href="https://gcms.labrulez.com/labrulez-bucket-strapi-h3hsga3/an_05_sca_180_054_en_93d1029b72.pdf"><strong>Full PDF for download</strong></a></li></ul><h5><strong>User Benefits</strong></h5><ul><li><a target="_blank" rel="noopener noreferrer" href="https://gcms.labrulez.com/library?mainauthorItems=1&amp;search=2060"><strong>NexisTM GC-2060</strong></a> provides reliable analysis of biodiesel samples regarding their ester and linolenic acid methyl ester contents using hydrogen as a cost-effective carrier gas&nbsp;</li><li>It delivers excellent repeatability and provides appropriate safety measures for the use of hydrogen as carrier gas&nbsp;</li><li>The optional multi-mode injection unit (MMI) offers performance equivalent to a conventional split-splitlessinjection unit (SPL), significantly reducing maintenance downtime</li></ul><p>Biofuels play an important role in enabling countriesto meet their greenhouse gas reduction targets. They can be produced from a range of raw materials, including plant oils, animal fats, and used cooking oils. Biodiesel is mainly being produced from rapeseed, soybean, and palm oils. Due to this diversity of feedstocks, continuous quality control is necessary as the quality of the raw material has an enormousimpact on the quality of the biodiesel.&nbsp;</p><p>The EN 14103:2020 describes the determination of total ester content and linolenic acid methyl ester content in biodiesel by means of gas chromatography with flame ionization detection (GC-FID). The total ester content covers a range of fatty acid methyl esters (FAME) from C6 to C24, and linolenic acid methyl ester is investigated separately as interfering reactive compound that might influence long-term stability of the biodiesel. According to the standard, the total ester content must be greater than 90 % (m/m) and the linolenic acid methyl ester content shall be between 1 and 15 % (m/m)1.</p><p>This study shows the analysis of biodiesel originating from rapeseed,soybean, and palm oil using the Nexis GC-2060.</p><h4><strong>Multi-Mode Injection Unit as Alternative&nbsp;</strong></h4><p>Shimadzu’s multi-mode injection unit (MMI) offers reliable splitsplitless mode functionality over a broad range of carbon numbers. It allows analysis of biodiesel samples with high repeatability and provides chromatographic results comparable to those measured with SPL as dedicated split-splitless injection unit. The use of MMI significantly shortens maintenance downtime from tens of minutes for a classical split-splitless injection unit to just a few minutes. Figure 3 gives a direct comparison of an exemplary rapeseed-based biodiesel sample measured with SPL (top) and MMI (bottom).</p><h4><strong>Conclusion</strong></h4><p><a target="_blank" rel="noopener noreferrer" href="https://gcms.labrulez.com/library?mainauthorItems=1&amp;search=2060"><strong>Nexis GC-2060</strong></a> provides reliable analysis of biodiesel samples regarding their ester and linolenic acid methyl ester content according to EN 14103:2020, covering the various ester types commonly in use. It allows repeatable analysis using hydrogen as a cost-effective carrier gas. The optional multi-mode injection unit (MMI) can be selected as alternative to a classical splitsplitlessinjection unit (SPL).</p><h3><strong>4. Waters Corporation / ASMS: Putting the (Atmospheric) Pressure on Forever Chemicals: A Targeted Analysis of GC Amenable PFAS using APGC–MS/MS</strong></h3><ul><li>Poster</li><li><a target="_blank" rel="noopener noreferrer" href="https://gcms.labrulez.com/labrulez-bucket-strapi-h3hsga3/720009413_dfa4082b45.pdf"><strong>Full PDF for download</strong></a></li></ul><p>This poster presents a targeted analytical method for the determination of gas chromatography (GC)-amenable PFAS compounds using atmospheric pressure gas chromatography coupled with tandem mass spectrometry (APGC-MS/MS). The study addresses a key limitation of conventional LC-MS/MS methods, which are highly effective for many PFAS but less suitable for more volatile species such as fluorotelomer alcohols (FTOHs), fluorotelomer acrylates (FTAcr), and fluorotelomer acetates (FTOAc). By incorporating GC-MS/MS analysis, laboratories can obtain a more complete characterization of PFAS contamination across environmental, biological, and food-contact materials.</p><p>The analytical workflow utilized an <a target="_blank" rel="noopener noreferrer" href="https://gcms.labrulez.com/library?mainauthorItems=10&amp;search=8890"><strong>Agilent 8890 gas chromatograph</strong></a> equipped with an autosampler and coupled to a <a target="_blank" rel="noopener noreferrer" href="https://lcms.labrulez.com/products/554"><strong>Waters Xevo TQ Absolute tandem mass spectrometer</strong></a> operated with APGC ionization in positive-ion mode. Separation was performed on an Rtx-200 capillary column, while data acquisition and quantification were managed using <a target="_blank" rel="noopener noreferrer" href="https://lcms.labrulez.com/products/1544"><strong>waters_connect software</strong></a>. Unlike traditional electron ionization (EI), APGC generated intact protonated molecular ions, significantly improving sensitivity and selectivity for GC-amenable PFAS. A method covering 35 PFAS compounds was developed, achieving lower limits of quantification (LLOQs) of 0.025–0.1 ng/mL for most analytes.</p><p>Several sample types were evaluated, including wastewater, surface water, soil, fish tissue, shrimp, and food-packaging materials. Environmental and biological samples were prepared according to EPA Method 1633A and had previously been analyzed by LC-MS/MS, allowing the GC-MS/MS method to serve as a complementary technique. Food-packaging samples were extracted with methanol containing ammonium hydroxide and analyzed for targeted PFAS. While no target PFAS were detected in the tested packaging materials, multiple GC-amenable PFAS were found in environmental samples. Fluorotelomer alcohols were the most frequently detected compounds, with wastewater and ski-wax-impacted soils showing the highest concentrations.</p><p>The results demonstrate that APGC-MS/MS provides a sensitive and robust solution for the analysis of volatile PFAS classes that may be missed by LC-MS/MS alone. The method delivered accurate quantification, effective chromatographic separation, and reliable recovery in spiked samples. The authors conclude that combining APGC-MS/MS with established LC-MS/MS workflows enables a more comprehensive assessment of PFAS contamination, particularly for emerging fluorotelomer compounds and other GC-amenable PFAS that are increasingly relevant in environmental monitoring and food-packaging investigations.</p></div></div></div></div></div></div></section></div></div></div></div></div></div></section>

News from LabRulezGCMS Library - Week 26, 2026

Article

Product

Application

Academy

Video

Software

Poster

Since 1991 DataApex develops and manufactures chromatography data stations. DataApex is constantly striving to provide users with efficient and up-to-date tools for chromatography data processing.

DataApex

Everything from the world of analytical chemistry in one place. We connect people in solving their problems. At Labrulez you will find all the necessary information easily, quickly and clearly. Stop searching and start finding.

LabRulez

My main interest is the identification of organic compounds by mass spectrometry in organic mixtures.

James Little/Mass Spec Interpretation Services

Thermo Scientific Trace™ TR-V1 GC Columns

Thermo Scientific™ TRACE TR-V1 GC Columns are mid-polarity, thick film columns.

<p><strong>Thermo Scientific™ TRACE TR-V1 GC Columns are mid-polarity, thick film columns.</strong></p><ul><li>Mid-polarity phase, 6% Cyanopropylphenyl Polysiloxane</li><li>Thick films for the analysis of volatile analytes</li><li>Low-bleed suitable for MS detection</li></ul><h4><strong>Recommended For:</strong></h4><ul><li>Volatile Organics</li><li>Alcohols</li><li>EPA 502.2, 608 and 624</li></ul><h4><strong>Similar To:</strong></h4><ul><li>DB-624</li><li>BPX Volatiles</li><li>Rtx Volatiles</li><li>VOCOL 56</li><li>OV-624</li><li>AT-624</li><li>HP-VOC</li><li>CP-Select 624CB</li><li>007-624</li><li>ZM-624</li></ul>

Thermo Scientific Trace™ TR-WAX GC Columns

Analyze a wide range of polar compounds with the Thermo Scientific™ TRACE™ TR-Wax GC Column.

<p><strong>Analyze a wide range of polar compounds with the Thermo Scientific™ TRACE™ TR-Wax GC Column. A polyethylene-glycol-based phase ideal for the analysis of all polar compounds, it is highly cross-linked and fully deactivated to provide excellent peak shape even with short chain alcohols.</strong></p><h4><strong>Engineered for Superior Performance</strong></h4><ul><li>Polar phase, polyethylene glycol</li><li>Highly cross-linked and fully deactivated</li><li>Solvent washable</li></ul><h4><strong>Excellent Quality and Reproducibility:</strong></h4><ul><li>Low-bleed even at elevated temperatures</li><li>Outstanding robustness for difficult separations</li><li>Reliable and reproducible performance</li></ul><h4><strong>Applications:</strong></h4><ul><li>Esters</li><li>Alcohols</li><li>Ketones</li><li>Glycols</li><li>Aromatic isomers</li></ul><h4><strong>Recommended Use:</strong></h4><ul><li>Aldehydes</li><li>Essential Oils</li></ul><h4><strong>Alternative Uses:</strong></h4><ul><li>Acids</li><li>Alcohols</li><li>Alcohols in beverages</li><li>Alditol acetates (sugars)</li><li>Amines–Aliphatic</li><li>Amines–Aromatic</li><li>Herbicides</li><li>Ketones</li><li>Nitroaromatics</li><li>Phenols</li><li>Volatiles</li></ul><h4><strong>Similar To:</strong></h4><ul><li>DB-Wax</li><li>BP20</li><li>Rtx™-Wax</li><li>Stabilwax™</li><li>HP20M</li><li>HP-Wax</li><li>HP-INNOWax</li><li>SUPELCOWAX™ 10</li><li>AT™-Wax</li><li>Nukol™</li><li>CP Wax52CB</li><li>SUPEROX II</li><li>Carbowax™</li><li>PE-WAX</li><li>ZBWAX</li></ul>

Thermo Scientific Trace™ TR-WaxMS GC Columns

For high-polarity separations as part of GC/MS analysis, choose the low-bleed, high polarity Thermo Scientific™TRACE™ TR-WaxMS GC Column. 

<p><strong>For high-polarity separations as part of GC/MS analysis, choose the low-bleed, high polarity Thermo Scientific™TRACE™ TR-WaxMS GC Column. The TRACE TR-WaxMS column is manufactured using a proprietary bonding technique that minimizes bleed and extends the maximum operating temperature (260 to 280 ̊C).</strong></p><h4><strong>Engineered for Superior Performance:</strong></h4><ul><li>Polar phase, polyethylene glycol</li><li>Proprietary bonding method for expanded operating temperatures</li><li>Extremely low-bleed for improved sensitivity and library matches</li><li>High stability with oxygen and water</li></ul><h4><strong>Excellent Quality and Reproducibility:</strong></h4><ul><li>Low-bleed even at elevated temperatures</li><li>Outstanding robustness for difficult separations</li><li>Reliable and reproducible performance</li></ul><p><img src="https://storage.googleapis.com/labrulez-bucket-strapi-h3hsga3/Thermo_Scientific_Trace_TR_Wax_MS_GC_Columns_676d6b9e2e.jpg" alt="Thermo Scientific: Trace™ TR-WaxMS GC Columns" srcset="https://storage.googleapis.com/labrulez-bucket-strapi-h3hsga3/thumbnail_Thermo_Scientific_Trace_TR_Wax_MS_GC_Columns_676d6b9e2e.jpg 244w," sizes="100vw" width="650" height="416"></p><h4><strong>Applications:</strong></h4><ul><li>Aromatic hydrocarbons</li><li>Food additives</li><li>Essential oils</li><li>Alcohols</li><li>Esters</li><li>Aldehydes</li><li>Ketones</li></ul><h4><strong>Recommended Use:</strong></h4><ul><li>Aldehydes</li><li>Essential Oils</li></ul><h4><strong>Alternative Uses:</strong></h4><ul><li>Acids</li><li>Alcohols</li><li>Alcohols in beverages</li><li>Alditol acetates (sugars)</li><li>Amines&amp;endash;Aliphatic</li><li>Amines&amp;endash;Aromatic</li><li>Herbicides</li><li>Ketones</li><li>Nitroaromatics</li><li>Phenols</li><li>Volatiles</li></ul><h4><strong>Similar To:</strong></h4><ul><li>DB-Wax</li><li>Rtx™-Wax</li><li>Stabilwax™</li><li>HP20M</li><li>BP20</li><li>HP-Wax</li><li>HP-INNOWax</li><li>SUPELCOWAX™ 10</li><li>AT™-Wax</li><li>Nukol™</li><li>CP Wax 52CB</li><li>ZB-Wax</li></ul>

Thermo Scientific Trace™ TR-FAME GC Columns

Choose Thermo Scientific™ TRACE™ TR-FAME GC Columns for separation of cis/trans isomers and fatty acid methyl esters (FAMEs) with various degrees of unsaturation.

<p><strong>Choose Thermo Scientific™ TRACE™ TR-FAME GC Columns for separation of cis/trans isomers and fatty acid methyl esters (FAMEs) with various degrees of unsaturation. The TRACE TR-FAME column is a cyanopropylphenyl-based phase specifically designed for the separation of FAMEs. It is also suitable for any application that requires a high-polarity column for use with MS detection.</strong></p><h4><strong>Excellent Quality and Reproducibility</strong></h4><ul><li>Low bleed for MS, even at elevated temperatures</li><li>Outstanding robustness for difficult separations</li><li>Reliable and reproducible performance</li><li>Polar phase, 70% cyanopropyl polysilphenylene-siloxane</li><li>Higher operating temperature than other columns</li></ul><h4><strong>Applications:</strong></h4><ul><li>FAMEs</li><li>FAMEs cis/trans isomers</li></ul><h4><strong>Similar To:</strong></h4><ul><li>DB-23</li><li>BPX70</li><li>Rtx™-2330</li><li>SP™-2330</li><li>CP-Sil 88</li><li>SP™-2380</li><li>HP-23</li><li>VF-23ms</li><li>007-23</li><li>AT™-Silar</li><li>PE-23</li></ul>

Thermo Scientific Trace™ TR-FFAP GC Columns

Low-bleed even at elevated temperatures. Chose the Thermo Scientific™ TRACE™ TR-FFAP GC Columns for outstanding robustness in difficult-to-analyze separations.

<p><strong>Low-bleed even at elevated temperatures. Chose the Thermo Scientific™ TRACE™ TR-FFAP GC Columns for outstanding robustness in difficult-to-analyze separations.</strong></p><h4><strong>Engineered Specifically for FFAP Analysis:</strong></h4><ul><li>Polar phase, TPA modified polyethylene glycol</li><li>Bonded FFAP phase</li><li>Quality tested for acidic compound analysis</li><li>Equivalent to USP G25 and G35</li><li>Excellent Quality and Reproducibility</li><li>Low-bleed even at elevated temperatures</li><li>Outstanding robustness for difficult-to-analyze separations</li><li>Reliable and reproducible performance</li></ul><p><img src="https://storage.googleapis.com/labrulez-bucket-strapi-h3hsga3/Thermo_Scientific_Trace_TR_FFAP_GC_Columns_56b870dff4.jpg" alt="Thermo Scientific: Trace™ TR-FFAP GC Columns" srcset="https://storage.googleapis.com/labrulez-bucket-strapi-h3hsga3/thumbnail_Thermo_Scientific_Trace_TR_FFAP_GC_Columns_56b870dff4.jpg 244w," sizes="100vw" width="650" height="416"></p><h4><strong>Recommended Use:</strong></h4><ul><li>Acids</li><li>FFAP analysis</li><li>Alcohols</li></ul>

Thermo Scientific Trace™ TR-BioDiesel GC Columns

Determine methanol, fatty acid methyl esters (FAMEs) and glycerides in biodiesel analysis with high performance and reproducibility using Thermo Scientific™ TRACE™ TR-BioDiesel GC Columns.

<p><strong>Determine methanol, fatty acid methyl esters (FAMEs) and glycerides in biodiesel analysis with high performance and reproducibility using Thermo Scientific™ TRACE™ TR-BioDiesel GC Columns.</strong>&nbsp;</p><p>Biodiesel is an important component in the development of carbon neutral fuels and specific GC columns within the TRACE range deliver robust performance to meet and exceed the methodology demands for this application area.</p><h4><strong>Columns Specifically Designed to Meet Your Biodiesel Analysis Needs:</strong></h4><ul><li><strong>TRACE TR-BioDiesel (M)</strong>; for determination of residual methanol content in biodiesel according to EN Method 14110</li><li><strong>TRACE TR-BioDiesel (G)</strong>; for the analysis of total glyceride content according to EN Method 14105</li><li><strong>TRACE TR-BioDiesel (F)</strong>; for the analysis of FAME content in biodiesel according to EN Method 14103</li><li><strong>TRACE TR-BioDiesel (G) ASTM</strong>; for the analysis of total glyceride content according to ASTM method D-6584</li></ul><h4><strong>Excellent Quality and Reproducibility:</strong></h4><ul><li>Low-bleed even at elevated temperatures</li><li>Outstanding robustness for difficult separations</li><li>Reliable and reproducible performance</li></ul>

Thermo Scientific Trace™ GC Columns for Pesticides

Identify organophosphate and organochlorine pesticides with high performance, sensitivity, and reproducibility using the Thermo Scientific™ TRACE™ GC Columns for Pesticides. 

<p><strong>Identify organophosphate and organochlorine pesticides with high performance, sensitivity, and reproducibility using the Thermo Scientific™ TRACE™ GC Columns for Pesticides. These columns are specifically designed and tested to meet the most stringent requirements for the analysis of pesticides and herbicides.</strong></p><h4><strong>Excellent Quality and Reproducibility:</strong></h4><ul><li>Low bleed decreases MS contamination</li><li>Innovative design facilitates use at higher temperatures</li><li>Column inertness results in minimal peak tailing and decreased breakdown of sensitive samples</li></ul><h4><strong>Alternative Uses:</strong></h4><ul><li>Chlorinated aromatics</li><li>Plant sterols</li><li>Pyrethroids</li></ul>

Thermo Scientific Trace™ GC Columns for Specific EPA Methods

Perform specific EPA methodologies with confidence and unsurpassed performance using the Thermo Scientific™ TRACE™ GC Capillary Columns for Specific EPA Methods. 

<p><strong>Perform specific EPA methodologies with confidence and unsurpassed performance using the Thermo Scientific™ TRACE™ GC Capillary Columns for Specific EPA Methods. These low-bleed and temperature-stable columns have been designed, manufactured and tested to provide consistent, reliable results from run-to-run and batch-to-batch.</strong></p><h4><strong>Columns Tailored Specifically for U.S. EPA Test Methods:</strong></h4><ul><li><strong>TRACE TR-524 and TRACE TR-525:</strong> U.S. EPA Drinking Water Test Methods 524 or 525</li><li><strong>TRACE TR-527:</strong> U.S. EPA Drinking Water Test Method 527, featuring the robust, low-bleed performance required for analysis of pesticides and flame retardants</li><li><strong>TRACE TR-8270: </strong>U.S. EPA Solid Waste Test Method 8270</li><li><strong>TRACE TR-8095: </strong>U.S. EPA Method 8095 for Explosives Testing, featuring high maximum temperature and low surface activity</li></ul><h4><strong>Excellent Quality and Reproducibility:</strong></h4><ul><li>Low bleed, even at elevated temperatures</li><li>Outstanding robustness for difficult separations</li><li>Reliable and reproducible performance</li></ul><h4><strong>Applications:</strong></h4><ul><li>Volatile organic compounds (VOCs)</li><li>Pesticides</li><li>Brominated flame retardants</li><li>Explosives</li></ul>

Thermo Scientific Trace™ GC Columns for Dioxin and PCB Analysis

Analyze dioxins and polychlorinated biphenyls (PCBs) with custom-tailored Thermo Scientific™ TRACE™ GC Columns for Dioxin and PCB Analysis

<p><strong>Analyze dioxins and polychlorinated biphenyls (PCBs) with custom-tailored Thermo Scientific™ TRACE™ GC Columns for Dioxin and PCB Analysis for unsurpassed performance and reproducibility.&nbsp;</strong></p><p>Optimized to meet the requirements of high-resolution GC/MS methods, these columns deliver optimum performance with exceptional stability and very low bleed. These low-polarity columns provide wide coverage of the 17 cogeners with the highest toxicological significance (2,3,7,8-chlorine substituted congeners).</p><h4><strong>Columns Tailored Specifically for Dioxins and PCBs:</strong></h4><ul><li><strong>TRACE TR-Dioxin 5MS: </strong>dioxin and furan testing</li><li><strong>TRACE TR-PCB 8MS: </strong>high-resolution GC/MS analysis of PCBs</li></ul><h4><strong>Excellent Quality and Reproducibility</strong></h4><ul><li>Low bleed, even at elevated temperatures</li><li>Outstanding robustness for difficult separations</li><li>Reliable and reproducible performance</li></ul><h4><strong>Applications:</strong></h4><ul><li>Furan (PCDF) Analysis</li><li>GC/MS for Furan (PCDF) Analysis</li><li>GC/MS for PCB Congener Analysis</li></ul>

Phenomenex Zebron ZB-1XT SimDist GC Columns

Zebron ZB-1XT SimDist columns deliver outstanding reproducibility and up to 70% higher efficiency thanks to Glass Infusion™ technology—ensuring sharper peaks, accurate high-temperature SimDist, and long column lifetime.

<h4><strong>Consistent, Reliable Results for Simulated Distillation</strong></h4><ul><li>Glass Infusion™ technology for higher efficiency and greater column-to-column reproducibility</li><li>Individual QC testing for every column</li><li>Up to 70 % higher efficiency than other columns</li><li>Increased accuracy for high temperature simulated distillation</li></ul><p>Want a flexible fused-silica alternative for SimDist testing? See <a target="_blank" rel="noopener noreferrer" href="https://gcms.labrulez.com/products/1563"><strong>ZB-1HT-Inferno</strong></a></p><h5><strong>Recommended Use</strong></h5><ul><li>ASTM Methods (D2887, D2887X, D3710, D6352, D7169), Crude Oil, Gasoline Fractions, Petroleum Distillates, Petroleum Fractions, Simulated Distillation, Vacuum Distillates</li></ul><h5><strong>Upgrade to Zebron from any 100 % dimethylpolysiloxane phase:</strong></h5><p><strong>Agilent®&nbsp;&nbsp;</strong>&nbsp;&nbsp;</p><ul><li>DB®-1</li><li>DB-HT SimDis</li><li>DB-PS1</li><li>DB-PS2887</li><li>CP-SimDist</li><li>CP-SimDist UltiMetal</li></ul><p><strong>Restek®</strong></p><ul><li>Rtx®-1</li><li>Rxi®-1HT</li><li>MXT®-1HT SimDist</li></ul><p><strong>SGE®</strong></p><ul><li>BP1</li><li>BPX1-SimD</li></ul><h3><strong>Sharper Peak Shape and Better Efficiency through Uniform Glass Infusion™ Coating Technology</strong></h3><ul><li><strong>Sharper Peaks and Higher Efficiency:</strong><ul><li>Glass Infusion Technology Provides &nbsp; &nbsp;&nbsp;</li><li>Uniform Coating and Minimizes</li><li>Unwanted Activity.</li></ul></li><li><strong>Consistency and Reliability:</strong><ul><li>Zebron Columns are INDIVIDUALLY</li><li>Tested for Better Reproducibility and</li><li>Overall Performance.</li></ul></li><li><strong>Higher Efficiency:</strong><ul><li>Up to 70 % Higher Column Efficiency.</li></ul></li><li><strong>Long Lifetime and Better Results:</strong><ul><li>Improved Resolution of C50/C52 &nbsp; &nbsp;&nbsp;</li><li>Hour after Hour.</li></ul></li><li><strong>Guaranteed:</strong><ul><li>100 % Risk-Free</li></ul></li></ul><p><img src="https://storage.googleapis.com/labrulez-bucket-strapi-h3hsga3/Phenomenex_Zebron_ZB_1_XT_Sim_Dist_GC_Columns_dd3e7f0c32.jpg" alt="Phenomenex: Zebron ZB-1XT SimDist GC Columns" srcset="https://storage.googleapis.com/labrulez-bucket-strapi-h3hsga3/thumbnail_Phenomenex_Zebron_ZB_1_XT_Sim_Dist_GC_Columns_dd3e7f0c32.jpg 146w," sizes="100vw" width="677" height="722"></p><h3><strong>Improved Recovery and Peak Shape</strong></h3><h4><strong>The Benefits of Glass Infusion™ Technology</strong></h4><p>The Zebron ZB-1XT SimDist metal columns employ a new proprietary bonding called Glass Infusion Technology. The Glass Infusion technology starts by depositing a very uniform layer of glass that completely covers the internal metal surfaces of the column. The result is a uniform coating throughout the column.</p><h5><strong>Glass Enclosed</strong></h5><ul><li>Uniform Glass Infusion ensures adequate covering of exposed metal to promote better recovery and peak shape.</li><li>Each Zebron ZB-1XT is individually tested to confirm and ensure excellent reproducibility.</li><li>The uniform glass coating provides a consistent foundation for stationary phase bonding, thus promoting better over-all efficiency and resolution.</li></ul><p><img src="https://storage.googleapis.com/labrulez-bucket-strapi-h3hsga3/Phenomenex_Glass_Enclosed_b434ad6540.jpg" alt="Phenomenex: Glass Enclosed" srcset="https://storage.googleapis.com/labrulez-bucket-strapi-h3hsga3/thumbnail_Phenomenex_Glass_Enclosed_b434ad6540.jpg 245w," sizes="100vw" width="709" height="232"></p><h5><strong>Exposed Metal</strong></h5><ul><li>Non-glass infused with exposed metal can cause tailing peaks and sample adsorption.</li><li>Some manufacturers batch test their columns, leading to poor column-to-column reproducibility.</li><li>These exposed surfaces result in abnormal bonding of the stationary phase which affects chromatographic performance, decreases efficiencies, and inconsistent performance between columns.</li></ul><p><img src="https://storage.googleapis.com/labrulez-bucket-strapi-h3hsga3/Phenomenex_Exposed_Metal_00e4466d96.jpg" alt="Phenomenex: Exposed Metal" srcset="https://storage.googleapis.com/labrulez-bucket-strapi-h3hsga3/thumbnail_Phenomenex_Exposed_Metal_00e4466d96.jpg 245w," sizes="100vw" width="706" height="237"></p>

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