How post run actions work in Clarity software

Introduction

Efficient data handling after chromatographic runs is essential for ensuring accurate evaluation, reporting, and workflow automation. Clarity Chromatography Software provides a set of post-run actions that can be configured to streamline operations. This article explains each available function, outlines the configuration steps, and demonstrates how these options can improve analytical productivity.

Accessing Post-Run Actions

Post-run settings are available in two main areas of Clarity:

• Single Analysis Tab – where actions can be configured for individual runs.
• Sequence Table – where post-run actions can be applied across multiple samples.

By default, many post-run columns are hidden in the sequence table. To enable them:

1. Open the Setup Columns dialog.
2. Locate post-run actions in the Hidden Columns list (at the end).
3. Display selected columns for easier configuration.

Categories of Post-Run Actions

1. Printing (Covered Separately)

Printing-related actions are documented in detail in the dedicated guide “How to Print a Report from Sequence”. They will not be discussed here.

2. Data Opening Options

• Open – Opens the finished chromatogram directly in the Chromatogram Window.
• Open in Calibration Window – Loads the chromatogram into the Calibration Window, facilitating immediate calibration adjustments.

3. Exporting Data

• Export Data – Exports result tables and other analytical outputs according to predefined export settings.
  • To configure:
    • Go to Instrument Window → Settings → Export Data.
    • The Export Data Settings dialog allows customization of output formats and locations.
  • By default, exports are saved in the same directory as chromatogram files, using identical filenames.

Important: Chromatograms must be opened in the Chromatogram Window for proper export. The software exports the data tables visible in that layout.

4. Chromatogram Export Formats

Four dedicated columns in the sequence allow exporting chromatograms into different file formats.

• Exported files contain only header information and raw data points used to construct chromatograms.
• This enables seamless integration with third-party tools or archival systems.

5. Running External Programs

Three columns are available for post-run execution of external applications.

• These can be configured to trigger scripts, data processors, or laboratory automation tasks after each measurement.
• One practical example is shown in the video series “How to Chain Sequence”, where this feature enables automated multi-step workflows.

6. SST (System Suitability Test) Inclusion

• Include in SST – Determines whether the chromatogram will be automatically included in SST evaluations when opened.
• Ensures compliance and system performance verification without additional manual steps.

7. Stored Calibration Preference

• Stored Calibration – Defines the default calibration source for a chromatogram.
  • If checked, the software opens the chromatogram with the calibration stored inside it, rather than the calibration file originally linked.
• Useful for consistency when archived data needs to be re-evaluated under the same calibration conditions.

8. Closing Chromatograms

• Close All – Closes all previously opened chromatograms after a run.
  • If combined with the Open option, Clarity will first close existing chromatograms and then open only the most recent result.
• Helps maintain a clean workspace and prevents confusion when working with multiple datasets.

Practical Applications

By combining these post-run actions, laboratories can:

• Automate routine data exports for LIMS integration.
• Standardize chromatogram handling across teams.
• Ensure compliance with SST requirements.
• Maintain an uncluttered and consistent Clarity environment.
• Extend Clarity’s capabilities through integration with external programs and scripts.

Conclusion

Clarity’s post-run actions provide analysts with powerful tools for automating workflows, managing data exports, and maintaining compliance. Proper configuration not only improves laboratory efficiency but also reduces manual intervention and potential errors. By leveraging these functions, laboratories can significantly streamline their analytical processes and maximize the software’s capabilities.

For additional demonstrations, consult the official Clarity tutorial series, including “How to Print a Report from Sequence” and “How to Chain Sequence”.